Attach to Form 990 or Form 990-EZ.
Go to
www.irs.gov/Form990 for instructions and the latest information.
| (i) Name of supported organization | (ii) EIN | (iii) Type of organization (described on lines 1- 10 above (see instructions)) | (iv) Is the organization listed in your governing document? | (v) Amount of monetary support (see instructions) | (vi) Amount of other support (see instructions) | |
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| Yes | No | |||||
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Total |
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Calendar year
(or fiscal year beginning in)
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(a) 2018 | (b) 2019 | (c) 2020 | (d) 2021 | (e) 2022 | (f) Total | |
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| 1 | Gifts, grants, contributions, and membership fees received. (Do not include any "unusual grant.") .. | ||||||
| 2 | Tax revenues levied for the organization's benefit and either paid to or expended on its behalf.... | ||||||
| 3 | The value of services or facilities furnished by a governmental unit to the organization without charge.. | ||||||
| 4 | Total. Add lines 1 through 3 | ||||||
| 5 | The portion of total contributions by each person (other than a governmental unit or publicly supported organization) included on line 1 that exceeds 2% of the amount shown on line 11, column (f) .. | ||||||
| 6 | Public support. Subtract line 5 from line 4. | ||||||
Calendar year
(or fiscal year beginning in)
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(a) 2018 | (b) 2019 | (c) 2020 | (d) 2021 | (e) 2022 | (f) Total | |
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| 7 | Amounts from line 4.. | ||||||
| 8 | Gross income from interest, dividends, payments received on securities loans, rents, royalties and income from similar sources... | ||||||
| 9 | Net income from unrelated business activities, whether or not the business is regularly carried on.. | ||||||
| 10 | Other income. Do not include gain or loss from the sale of capital assets (Explain in Part VI.).. | ||||||
| 11 | Total support. Add lines 7 through 10 | ||||||
Calendar year (or fiscal year beginning in) ![]() |
(a) 2018 | (b) 2019 | (c) 2020 | (d) 2021 | (e) 2022 | (f) Total | |
|---|---|---|---|---|---|---|---|
| 1 | Gifts, grants, contributions, and membership fees received. (Do not include any "unusual grants.") . | ||||||
| 2 | Gross receipts from admissions, merchandise sold or services performed, or facilities furnished in any activity that is related to the organization's tax-exempt purpose | ||||||
| 3 | Gross receipts from activities that are not an unrelated trade or business under section 513 ..... | ||||||
| 4 | Tax revenues levied for the organization's benefit and either paid to or expended on its behalf... | ||||||
| 5 | The value of services or facilities furnished by a governmental unit to the organization without charge | ||||||
| 6 | Total. Add lines 1 through 5 | ||||||
| 7a | Amounts included on lines 1, 2, and 3 received from disqualified persons | ||||||
| b | Amounts included on lines 2 and 3 received from other than disqualified persons that exceed the greater of $5,000 or 1% of the amount on line 13 for the year. | ||||||
| c | Add lines 7a and 7b.. | ||||||
| 8 | Public support. (Subtract line 7c from line 6.) | ||||||
Calendar year (or fiscal year beginning in) ![]() |
(a) 2018 | (b) 2019 | (c) 2020 | (d) 2021 | (e) 2022 | (f) Total | |
|---|---|---|---|---|---|---|---|
| 9 | Amounts from line 6... | ||||||
| 10a | Gross income from interest, dividends, payments received on securities loans, rents, royalties and income from similar sources.. | ||||||
| b | Unrelated business taxable income (less section 511 taxes) from businesses acquired after June 30, 1975. | ||||||
| c | Add lines 10a and 10b. | ||||||
| 11 | Net income from unrelated business activities not included on line 10b, whether or not the business is regularly carried on. | ||||||
| 12 | Other income. Do not include gain or loss from the sale of capital assets (Explain in Part VI.) .. | ||||||
| 13 | Total support. (Add lines 9, 10c, 11, and 12.).. | ||||||
| Section A - Adjusted Net Income | (A) Prior Year |
(B) Current Year (optional) |
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| 1 | Net short-term capital gain | 1 | ||||
| 2 | Recoveries of prior-year distributions | 2 | ||||
| 3 | Other gross income (see instructions) | 3 | ||||
| 4 | Add lines 1 through 3 | 4 | ||||
| 5 | Depreciation and depletion | 5 | ||||
| 6 | Portion of operating expenses paid or incurred for production or collection of gross income or for management, conservation, or maintenance of property held for production of income (see instructions) | 6 | ||||
| 7 | Other expenses (see instructions) | 7 | ||||
| 8 | Adjusted Net Income (subtract lines 5, 6 and 7 from line 4) | 8 | ||||
| Section B - Minimum Asset Amount | (A) Prior Year |
(B) Current Year (optional) |
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| 1 | Aggregate fair market value of all non-exempt-use assets (see instructions for short tax year or assets held for part of year): | 1 | ||||
| a | Average monthly value of securities | 1a | ||||
| b | Average monthly cash balances | 1b | ||||
| c | Fair market value of other non-exempt-use assets | 1c | ||||
| d | Total (add lines 1a, 1b, and 1c) | 1d | ||||
| e |
Discount claimed for blockage or other factors (explain in detail in Part VI): |
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| 2 | Acquisition indebtedness applicable to non-exempt use assets | 2 | ||||
| 3 | Subtract line 2 from line 1d | 3 | ||||
| 4 | Cash deemed held for exempt use. Enter 0.015 of line 3 (for greater amount, see instructions). | 4 | ||||
| 5 | Net value of non-exempt-use assets (subtract line 4 from line 3) | 5 | ||||
| 6 | Multiply line 5 by 0.035 | 6 | ||||
| 7 | Recoveries of prior-year distributions | 7 | ||||
| 8 | Minimum Asset Amount (add line 7 to line 6) | 8 | ||||
| Section C - Distributable Amount | Current Year | |||||
| 1 | Adjusted net income for prior year (from Section A, line 8, Column A) | 1 | ||||
| 2 | Enter 85% of line 1 | 2 | ||||
| 3 | Minimum asset amount for prior year (from Section B, line 8, Column A) | 3 | ||||
| 4 | Enter greater of line 2 or line 3 | 4 | ||||
| 5 | Income tax imposed in prior year | 5 | ||||
| 6 | Distributable Amount. Subtract line 5 from line 4, unless subject to emergency temporary reduction (see instructions) | 6 | ||||
| Section D - Distributions | Current Year | |
|---|---|---|
| 1 Amounts paid to supported organizations to accomplish exempt purposes | 1 | |
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2
Amounts paid to perform activity that directly furthers exempt purposes of supported organizations, in excess of income from activity |
2 | |
| 3 Administrative expenses paid to accomplish exempt purposes of supported organizations | 3 | |
| 4 Amounts paid to acquire exempt-use assets | 4 | |
| 5 Qualified set-aside amounts (prior IRS approval required - provide details in Part VI) | 5 | |
| 6 Other distributions (describe in Part VI). See instructions | 6 | |
| 7Total annual distributions. Add lines 1 through 6. | 7 | |
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8
Distributions to attentive supported organizations to which the organization is responsive (provide details in Part VI). See instructions |
8 | |
| 9 Distributable amount for 2022 from Section C, line 6 | 9 | |
| 10 Line 8 amount divided by Line 9 amount | 10 | |
| Section E - Distribution Allocations (see instructions) |
(i) Excess Distributions |
(ii) Underdistributions Pre-2022 |
(iii) Distributable Amount for 2022 |
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|---|---|---|---|---|
| 1 Distributable amount for 2022 from Section C, line 6 | ||||
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2
Underdistributions, if any, for years prior to 2022 (reasonable cause required-- explain in Part VI).
See instructions. |
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| 3 Excess distributions carryover, if any, to 2022: | ||||
| a From 2017....... | ||||
| b From 2018....... | ||||
| c From 2019....... | ||||
| d From 2020....... | ||||
| e From 2021....... | ||||
| fTotal of lines 3a through e | ||||
| g Applied to underdistributions of prior years | ||||
| h Applied to 2022 distributable amount | ||||
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i
Carryover from 2017 not applied (see instructions) |
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| j Remainder. Subtract lines 3g, 3h, and 3i from line 3f. | ||||
| 4Distributions for 2022 from Section D, line 7: | ||||
| $ | ||||
| a Applied to underdistributions of prior years | ||||
| b Applied to 2022 distributable amount | ||||
| c Remainder. Subtract lines 4a and 4b from line 4. | ||||
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5
Remaining underdistributions for years prior to 2022, if any. Subtract lines 3g and 4a from line 2. If the amount is greater than zero, explain in Part VI. See instructions. |
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6
Remaining underdistributions for 2022. Subtract lines 3h and 4b from line 1. If the amount is greater than zero, explain in Part VI. See instructions. |
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7 Excess distributions carryover to 2023. Add lines 3j and 4c. |
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| 8 Breakdown of line 7: | ||||
| a Excess from 2018..... | ||||
| b Excess from 2019..... | ||||
| c Excess from 2020..... | ||||
| d Excess from 2021..... | ||||
| e Excess from 2022..... | ||||
| Facts And Circumstances Test |
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| Return Reference | Explanation |
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| SCHEDULE A, PART I, LINE 4 | COOPERATION AGREEMENTS AND COLLABORATIONS THE STOWERS INSTITUTE CONDUCTS MEDICAL RESEARCH IN CONJUNCTION WITH THE UNIVERSITY OF KANSAS (KU) AND ITS AFFILIATES THE UNIVERSITY OF KANSAS HOSPITAL AUTHORITY AND THE UNIVERSITY OF KANSAS MEDICAL CENTER (KUMC), PURSUANT TO A WRITTEN MEMORANDUM OF UNDERSTANDING. KUMC IS THE ACADEMIC HEALTH SCIENCE CENTER FOR THE LARGEST PUBLIC RESEARCH UNIVERSITY IN THE STATE OF KANSAS. KUMC OFFERS PROGRAMS AND SERVICES THAT FOCUS ON EDUCATION, RESEARCH, PATIENT CARE, AND COMMUNITY ENGAGEMENT. AS OF DECEMBER 31, 2022, FIVE KUMC STUDENTS HAVE RECEIVED M.S. DEGREES AND 49 KUMC STUDENTS HAVE RECEIVED PH.D. DEGREES FOR THESIS WORK PERFORMED IN STOWERS INSTITUTE LABS. KUMC IS AFFILIATED WITH THE UNIVERSITY OF KANSAS HEALTH SYSTEM, A NONPROFIT INDEPENDENT HOSPITAL SYSTEM CO-LOCATED WITH THE MAIN KUMC CAMPUS IN KANSAS CITY, KANSAS. IN 2022, 14 STOWERS RESEARCH PROGRAM LEADERS SERVED AS ADJUNCT FACULTY IN THREE KUMC DEPARTMENTS. THESE APPOINTMENTS INCLUDED NINE FULL PROFESSORS, ONE ASSOCIATE PROFESSOR, AND FOUR ASSISTANT PROFESSORS. IN 2022, 35 OF THE STOWERS INSTITUTE'S 58 ORIGINAL RESEARCH PUBLICATIONS INCLUDED BOTH STOWERS INSTITUTE AND KUMC AFFILIATIONS. 10 KUMC STUDENTS PERFORMED PREDOCTORAL RESEARCH IN STOWERS LABS IN 2022. THE STOWERS INSTITUTE IS ALSO A CONSORTIUM MEMBER OF THE UNIVERSITY OF KANSAS CANCER CENTER AT KUMC, A CANCER RESEARCH AND CARE PARTNERSHIP SPANNING TWO STATES AND INVOLVING COLLABORATION AMONG RESEARCHERS, PHYSICIANS, AND CANCER SUPPORT PROFESSIONALS IN BASIC, TRANSLATIONAL, AND CLINICAL RESEARCH AREAS. IN JUNE 2012, THE NIH'S NATIONAL CANCER INSTITUTE (NCI) NAMED THE UNIVERSITY OF KANSAS CANCER CENTER AN NCI-DESIGNATED CANCER CENTER, PART OF A PILLAR OF FEDERAL CANCER RESEARCH EFFORTS AND INTEGRAL TO THE NCI'S PROGRAMS FOR STUDYING, TREATING, AND PREVENTING CANCER. IN 2022, THE NCI NAMED THE UNIVERSITY OF KANSAS CANCER CENTER AN NCI-DESIGNATED COMPREHENSIVE CANCER CENTER - THE HIGHEST HONOR BESTOWED BY THE NCI, THE ONLY SUCH CENTER IN THE REGION, AND ONE OF ONLY 53 CENTERS IN THE UNITED STATES. IN 2022, 10 STOWERS RESEARCH PROGRAM LEADERS WERE MEMBERS OF THE UNIVERSITY OF KANSAS CANCER CENTER'S CANCER BIOLOGY RESEARCH PROGRAM, INCLUDING LINHENG LI, PH.D., WHO SERVES AS CO-LEADER OF THE PROGRAM. IN 2022, STOWERS INVESTIGATOR LINHENG LI, PH.D., CONTINUED A COLLABORATION WITH THE UNIVERSITY OF KANSAS CANCER CENTER AND CHILDREN'S MERCY KANSAS CITY TO INVESTIGATE APPROACHES TO TREAT LEUKEMIA. THIS RESEARCH FOCUSES ON TARGETING CANCER STEM CELLS TO HELP REDUCE THE RECURRENCE OF CANCER AFTER A PATIENT GOES INTO REMISSION. THE COLLABORATION BUILDS ON FOUNDATIONAL RESEARCH FROM THE LI LAB THAT HAS CHARACTERIZED CANCER STEM CELLS AT MOLECULAR AND CELLULAR LEVELS AND HAS PRODUCED PEER-REVIEWED SCIENTIFIC PUBLICATIONS. CHILDREN'S MERCY IS THE SPONSOR OF A RELATED CLINICAL RESEARCH STUDY, "LOW-DOSE DAUNORUBICIN IN PEDIATRIC PATIENTS WITH RELAPSED/REFRACTORY ACUTE LEUKEMIA," WHICH IS DESIGNED TO ASSESS THE FEASIBILITY AND TOLERABILITY OF ADMINISTERING A LOW DOSE OF THE DRUG TO PEDIATRIC PATIENTS WITH RELAPSED OR REFRACTORY ACUTE MYELOID LEUKEMIA (AML) OR ACUTE LYMPHOBLASTIC LEUKEMIA (ALL), AND TO OBTAIN PRELIMINARY DATA ON THE DRUG ENGAGING ITS TARGET. IN 2022, STOWERS INSTITUTE FOR MEDICAL RESEARCH SCIENTISTS COLLABORATED WITH RESEARCHERS AT 108 NATIONAL AND 102 INTERNATIONAL INSTITUTIONS INCLUDING DOZENS OF HOSPITALS, MEDICAL CENTERS, AND MEDICAL SCHOOLS. MANY OF THESE COLLABORATIONS RESULTED IN DISCOVERIES THAT MERITED PUBLICATION IN LEADING PEER-REVIEWED SCIENTIFIC JOURNALS AND/OR SUCCESSFULLY FUNDED GRANT AWARDS. THE STOWERS INSTITUTE PARTICIPATED IN RESEARCH COLLABORATIONS IN CONJUNCTION WITH THE FOLLOWING US HOSPITALS, PURSUANT TO AN UNDERSTANDING TO MAINTAIN CONTINUING CLOSE COOPERATION IN THE ACTIVE CONDUCT OF MEDICAL RESEARCH IN 2022: Baylor College of Medicine, Houston, TX; Boston University School of Medicine, Boston, MA; Children's Hospital of Philadelphia, Philadelphia, PA; Children's Mercy Kansas City, Kansas City, MO; Cincinnati Children's Hospital Medical Center, Cincinnati, OH; Dana-Farber Cancer Institute, Boston, MA; David Geffen School of Medicine at the University of California, Los Angeles, Los Angeles, CA; Duke University School of Medicine, Durham, NC; Fred Hutchinson Cancer Research Center, Seattle, WA; Greater Baltimore Medical Center, Towson, MD; Harvard Medical School, Boston, MA; Howard University College of Medicine, Washington, DC; Johns Hopkins University School of Medicine, Baltimore, MD; Keck School of Medicine of the University of Southern California, Los Angeles, CA; MD Anderson Cancer Center, Houston, TX; New York Institute of Technology, College of Osteopathic Medicine, Glen Head, NY; New York University Grossman School of Medicine, New York, NY; Northwestern University Feinberg School of Medicine, Chicago, IL; Ochsner Health System, Jefferson, LA; Oregon Health and Science University School of Medicine, Portland, OR; Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA; Rutgers Cancer Institute of New Jersey, New Brunswick, NJ; Saint Louis University School of Medicine, Saint Louis, MO; Seattle Children's Hospital, Seattle, WA; Shriners Hospitals for Children, Tampa, FL; Stanford University School of Medicine, Stanford, CA; Tulane University School of Medicine, New Orleans, LA; UConn Health, Farmington, CT; University of California at Davis School of Medicine, Sacramento, CA; University of California, San Francisco, San Francisco, CA; University of Colorado Anschutz Medical Campus, Aurora, CO; University of Florida College of Medicine, Gainesville, FL; University of Massachusetts Medical School, Worcester, MA; University of Oklahoma Health Sciences Center, Oklahoma City, OK; University of Pittsburgh Cancer Institute, Pittsburgh, PA; University of Pittsburgh School of Medicine, Pittsburgh, PA; University of Rochester Medical Center, Rochester, NY; University of Tennessee Health Science Center, Memphis, TN; University of Texas Southwestern Medical Center, Dallas, TX; University of Washington School of Medicine, Seattle, WA; Washington University School of Medicine in St. Louis, Saint Louis, MO AND Yale University School of Medicine, New Haven, CT. TO CARRY OUT THE RESEARCH DESCRIBED IN THE FOLLOWING EXAMPLES, THE STOWERS INSTITUTE AND HOSPITAL, MEDICAL CENTER, OR MEDICAL SCHOOL ENTERED INTO A COOPERATION AGREEMENT PURSUANT TO WHICH THEY AGREED TO ESTABLISH, DEVELOP, ADMINISTER, AND MAINTAIN CONTINUING CLOSE COOPERATION IN THE ACTIVE CONDUCT OF MEDICAL RESEARCH, INCLUDING THROUGH SPECIFIC COOPERATIVE EFFORTS IN THE AREAS OF RESEARCH, SHARING OF INFORMATION, PURSUANT OF JOINT GRANTS, INTERACTION OF STAFF, ADJUNCT/JOINT APPOINTMENTS, AND SHARING OF FACILITIES. TO ASSURE THE SUCCESS OF THEIR COOPERATIVE RELATIONSHIP, EACH AGREED TO ENGAGE IN EFFECTIVE, COORDINATED, AND ONGOING PLANNING, OVERSIGHT, AND COMMUNICATION, AND TO COMMIT THE NECESSARY RESOURCES, BOTH HUMAN AND MONETARY, TO SUPPORT, FACILITATE, AND PROMOTE THE COOPERATION. JOINT MEDICAL RESEARCH ON THE CHARACTERIZATION OF INTESTINAL STEM CELLS - THE LI LAB PERFORMED JOINT MEDICAL RESEARCH ON THE CHARACTERIZATION OF INTESTINAL STEM CELLS WITH COLLABORATORS AT CINCINNATI CHILDREN'S HOSPITAL MEDICAL CENTER; DAVID GEFFEN SCHOOL OF MEDICINE AT THE UNIVERSITY OF CALIFORNIA, LOS ANGELES; OREGON HEALTH AND SCIENCE UNIVERSITY SCHOOL OF MEDICINE; STANFORD UNIVERSITY SCHOOL OF MEDICINE; AND UNIVERSITY OF PITTSBURGH CANCER INSTITUTE. INTESTINAL DISEASES RANGING FROM CROHN'S DISEASE TO COLITIS TO CANCER MAY BENEFIT FROM INTESTINAL STEM CELL THERAPIES. THIS RESEARCH ADVANCES THE UNDERSTANDING OF THE BIOLOGY OF STEM CELLS THAT RESIDE IN THE INTESTINE AND EXPLORES HOW THEY CAN BE USED TO TREAT AND CURE INTESTINAL DISEASES. THIS RESEARCH COLLABORATION IS SUPPORTED IN PART BY AN NIH GRANT AWARDED BY THE NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES. JOINT MEDICAL RESEARCH ON SENSORY HAIR CELL REGENERATION - THE PIOTROWSKI LAB PERFORMED JOINT MEDICAL RESEARCH ON ZEBRAFISH HAIR CELL REGENERATION WITH COLLABORATORS AT THE STANFORD UNIVERSITY SCHOOL OF MEDICINE, KECK SCHOOL OF MEDICINE OF THE UNIVERSITY OF SOUTHERN CALIFORNIA, BAYLOR COLLEGE OF MEDICINE, AND SUNNYBROOK RESEARCH INSTITUTE, TORONTO, CANADA. IN HUMANS, HEARING LOSS CAUSED BY INNER EAR HAIR CELL DEGENERATION IS ONE OF THE MOST WIDESPREAD SENSORY DISABILITIES IN THE WORLD WITH 30% OF PEOPLE BETWEEN AGES 65-75 BEING AFFECTED. IN HUMANS AND MAMMALS, HAIR CELLS ARE UNABLE TO REGENERATE, SO ANY DAMAGE OR LOSS OF HAIR CELLS IS PERMANENT. IN ZEBRAFISH, HOWEVER, HAIR CELLS REGENERATE THROUGHOUT LIFE. THE GOAL OF THIS WORK IS TO DETERMINE GENE REGULATORY NETWORKS UNDERLYING ZEBRAFISH HAIR CELL REGENERATION. THE RESULTS WILL HELP IDENTIFY STRATEGIES TO RESTORE LOST HAIR CELLS IN MAMMALS. THIS RESEARCH IS SUPPORTED IN PART BY A GRANT FROM THE HEARING HEALTH FOUNDATION. JOINT MEDICAL RESEARCH ON THE MOLECULAR ORIGINS OF FEMALE REPR |
| Software ID: | |
| Software Version: |
Attach to Form 990 or 990-EZ.
Go to www.irs.gov/Form990 for the latest information.
| Return Reference | Explanation |
|---|---|
| FORM 990, PART III, LINE 1 | THE STOWERS INSTITUTE FOR MEDICAL RESEARCH ("SIMR") PERFORMS MEDICAL RESEARCH IN THE PUBLIC INTEREST WITH THE GOAL OF EXPANDING THE UNDERSTANDING OF FUNDAMENTAL PROCESSES IN LIVING CELLS AND IMPROVING LIFE'S QUALITY THROUGH INNOVATIVE APPROACHES TO THE CAUSES, TREATMENT, AND PREVENTION OF DISEASE. |
| FORM 990, PART III, LINE 4A | 2022 Program Service Accomplishments The Stowers Institute for Medical Research ("Stowers Institute"Institute") is a private, nonprofit medical research organization. The Institute was founded in 1994 by Jim and Virginia Stowers, who each survived a bout with cancer and subsequently dedicated their fortune to supporting fundamental research in molecular and cell biology, development, regeneration, genetics, and neuroscience that will provide long-term solutions to human diseases. The Stowers Institute conducts basic biomedical research in the public interest that will ultimately provide a greater understanding of the genes, proteins, and biological processes that control how cells in our bodies multiply, form tissues, and die. Studying the fundamental biology of cells and organisms enables scientists to discover how genes and molecular processes cause many diseases, including cancer, birth defects, and dementia. History has shown that foundational medical research is often a key first step in the development of new treatments, cures, and preventions for many human diseases. 2022 Notable Research Results In 2022, Stowers research teams made discoveries meriting publication in leading peer-reviewed scientific journals - 58 original research papers in all. Stowers research teams also produced 24 other publications including reviews, commentaries, book chapters, and books. Some of the highlights among these papers and other advances involving Stowers research include the following: The Gerton Lab participated in a multi-institutional, international collaboration to fill in approximately 100 gaps in the DNA sequence of Human Genome Project, thus generating the first complete human reference genome. The missing genetic sequences were particularly difficult to assemble due to their length, similarity, and repetition. Stowers researchers contributed to the development of imaging techniques, DNA amplification methods, and bioinformatics approaches to determine the exact number and location of these repetitive regions, which happen to be important components of human genetic makeup and diversity. This research effort resulted in three articles published on April 1, 2022, in Science. The Gibson Lab developed a precise operational model for the stinging organelle of the starlet sea anemone, providing crucial insights into the extraordinarily complex architecture and firing mechanism of stinging organelles. This work revealed that the energy required for piercing and poisoning a target with the stinger is stored within multiple organelle substructures. The researchers characterized the explosive discharge and biomechanical transformation of the stinger during firing. Insights from the work could lead to beneficial applications in medicine, including the development of microscopic therapeutic delivery devices for humans. This report was published on June 17, 2022, in Nature Communications. The Halfmann Lab uncovered mechanistic details about a switch-like property of the immune system. In response to a very small stimulus such as an invading molecule, a large protein complex called a signalosome is assembled which activates the immune system in an all-or-nothing fashion. They found that a large energy barrier prevents signalosome assembly from easily occurring but that this same barrier enables an adapter protein that encodes the switch to naturally be supersaturated within a cell. This in turn increases the certainty and rapidity of assembly at some point in the cell's future. The findings have broad implications for uncovering the causes and progression of inflammatory illness and other age-related diseases like Alzheimer's. This research was published on June 21, 2022, in eLife. The Piotrowski Lab discovered that in zebrafish, the regeneration of sensory hair cells occurs in three sequential phases. These cells, which help the fish detect water movement, are very similar to hair cells of the human inner ear that allow us to hear, except that human hair cells do not regenerate. Identifying detailed molecular mechanisms that allow zebrafish hair cell regeneration to occur can help reveal how this process is blocked or not occurring in mammals. This study was published on March 21, 2022, in Developmental Cell. Related research from the lab uncovered how macrophages, a type of white blood cell, are activated when repairing and regenerating zebrafish sensory hair cells. A single population of macrophages sequentially and independently transitions between three anti-inflammatory phases, a finding that has potential application for designing regenerative immunotherapies in humans. This work was published on September 20, 2022, in Nature Communications. The Rohner Lab investigated how cavefish have developed unique metabolic adaptations to survive in extreme environments that are usually nutrient-scarce except for brief "feast" periods of intense feeding. Despite having high levels of body fat and blood sugar which can be associated with metabolic disorders in humans, the fish remain healthy. The researchers identified many DNA elements that were similar in the genomes of two different cavefish populations but dissimilar in their river fish cousins. Knowledge about the role these cavefish DNA elements play in metabolism may potentially help determine targets for drugs treating metabolic conditions in humans. This study was published on June 17, 2022, in Nature Genetics. The SNCHEZ Alvarado Lab discovered a new isolate of flatworms located in Guanajuato, Mexico, while leading a group of undergraduate students in a developmental biology workshop. The new isolate named Girardia sp. (Guanajuato) is similar in many ways to several widely studied flatworm species but has several unique features including an unusual method of locomotion and a resistance to radiation, potentially applicable to human cancer patients undergoing radiation therapy. This research was published on June 13, 2022, in Developmental Biology. Other research from the lab led to novel findings about sex chromosome evolution in an island-specific flatworm strain and the positioning of flatworms as a new genetic system for studying natural variation in regeneration and aging traits. This work was published on June 1, 2022, in Nature. The Trainor Lab published two studies investigating genetic mutations that result in severe craniofacial conditions like Treacher-Collins Syndrome. Congenital craniofacial defects arise from disruptions early in the development of cells responsible for forming cartilage, tissue, and bone of the head and face. The studies examined the effects of mutations in subunits of RNA Polymerase I and Nucleolin on cell function and craniofacial development in mice and zebrafish. A comprehensive understanding the basis for congenital conditions using research models of the diseases may lead to discoveries on how to prevent them. These studies were published on June 28, 2022, in Development and on July 26, 2022, in Proceedings of the National Academy of Sciences USA. The Workman Lab published a pair of studies revealing a key link between two biological processes involved in creating protein complexity out of information stored in the human genome. Using a human cell line, the researchers demonstrated a direct, physical linkage between the processes of transcription, which creates protein-producing instructions from a gene, and alternative splicing, which generates different versions of the instructions giving rise to related but distinct proteins. A protein involved in the direct interaction, SETD2, is mutated in many cancers, especially in kidney carcinoma. This work provides new information that can now be studied for its relevance in the context of cancers and as a target for regulating alternative splicing. These studies were published on November 18, 2021, and March 4, 2022, in Nature Communications. The Zanders Lab discovered that a rule-breaking selfish gene family has persisted for over 100 million years. Selfish genes violate the general law of inheritance so that they are inherited by offspring at a rate higher than 50%. The researchers discovered that the wtf selfish gene family in four different yeast species has evaded natural selection at least 10 times longer than believed possible, transforming how scientists may search for similar genes in other species. In related research, the lab uncovered new details about how the wtf4 gene uses a poison-antidote system to increase its transmission to the next generation, specifically the timing and distribution of poison and antidote proteins in developing yeast spores. These findings may have implications for designing systems utilizing selfish genes for pathogenic pest or vector-borne disease control. The study was published on December 7, 2022, in eLife. |
| FORM 990, PART III, LINE 4A - CONT'D | Comprehensive Lists of 2022 Original Research Papers, Reviews, Commentaries, Chapters, and Books Original Research Papers 1. Nr6a1 controls Hox expression dynamics and is a master regulator of vertebrate trunk development. Chang YC, Manent J, Schroeder J, Wong SFL, Hauswirth GM, Shylo NA, Moore EL, Achilleos A, Garside V, Polo JM, Trainor P, McGlinn E. Nat Commun. 2022;13:7766 doi: 10.1038/s41467-022-35303-4. 2. S. pombe wtf use dual transcriptional regulation and selective protein exclusion from spores to cause meiotic drive. Nuckolls NL, Nidamangala Srinivasa A, Mok AC, Helston RM, Bravo Nunez MA, Lange JJ, Gallagher TJ, Seidel CW, Zanders SE. PLos Genet. 2022:e1009847 doi: 10.1371/journal.pgen.1009847. 3. Deciphering the role of retinoic acid in hepatic patterning and induction in the mouse. Guertin TM, Palaria A, Mager J, Sandell LL, Trainor PA, Tremblay KD. Dev Biol. 2022;491:31-42. 4. Genome-wide quantification of contributions to sexual fitness identifies genes required for spore viability and health in fission yeast. Billmyre RB, Eickbush MT, Craig CJ, Lange JJ, Wood C, Helston RM, Zanders SE. PLoS Genet. 2022;18:e1010462 doi: 10.1371/journal.pgen.1010462. 5. Rap1 prevents fusions between long telomeres in fission yeast. Pan L, Tormey D, Bobon N, Baumann P. EMBO J. 2022:e110458. 6. Paramutation-like epigenetic conversion by piRNA at the telomere of Drosophila virilis. Dorador AP, Dalikova M, Cerbin S, Stillman CM, Zych MG, Hawley RS, Miller DE, Ray DA, Funikov SY, Evgen'ev MB, Blumenstiel JP. Biology (Basel). 2022;11 doi: 10.3390/biology11101480. 7. Semi-automated assembly of high-quality diploid human reference genomes. Jarvis ED, Formenti G, Rhie A, Guarracino A, Yang C, Wood J, Tracey A, Thibaud-Nissen F, Vollger MR, Porubsky D, Cheng H, Asri M, Logsdon GA, Carnevali P, Chaisson MJP, Chin CS, Cody S, Collins J, Ebert P, Escalona M, Fedrigo O, Fulton RS, Fulton LL, Garg S, Gerton JL, Ghurye J, Granat A, Green RE, Harvey W, Hasenfeld P, Hastie A, Haukness M, Jaeger EB, Jain M, Kirsche M, Kolmogorov M, Korbel JO, Koren S, Korlach J, Lee J, Li D, Lindsay T, Lucas J, Luo F, Marschall T, Mitchell MW, McDaniel J, Nie F, Olsen HE, Olson ND, Pesout T, Potapova T, Puiu D, Regier A, Ruan J, Salzberg SL, Sanders AD, Schatz MC, Schmitt A, Schneider VA, Selvaraj S, Shafin K, Shumate A, Stitziel NO, Stober C, Torrance J, Wagner J, Wang J, Wenger A, Xiao C, Zimin AV, Zhang G, Wang T, Li H, Garrison E, Haussler D, Hall I, Zook JM, Eichler EE, Phillippy AM, Paten B, Howe K, Miga KH, Human Pangenome Reference C. Nature. 2022;611:519-531. 8. The wtf meiotic driver gene family has unexpectedly persisted for over 100 million years. De Carvalho M, Jia GS, Nidamangala Srinivasa A, Billmyre RB, Xu YH, Lange JJ, Sabbarini IM, Du LL, Zanders SE. eLife. 2022;11. doi: 10.7554/eLife.81149. 9. Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies. Matentzoglu N, Goutte-Gattat D, Tan SZK, Balhoff JP, Carbon S, Caron AR, Duncan WD, Flack JE, Haendel M, Harris NL, Hogan WR, Hoyt CT, Jackson RC, Kim H, Kir H, Larralde M, McMurry JA, Overton JA, Peters B, Pilgrim C, Stefancsik R, Robb SM, Toro S, Vasilevsky NA, Walls R, Mungall CJ, Osumi-Sutherland D. Database (Oxford). 2022;2022. 10. Lamb-type solution and properties of unsteady Stokes equation. Fouxon I, Leshansky A, Rubinstein B, Or Y. Phys Rev Fluids. 2022;7:094103 doi: 10.1103/PhysRevFluids.7.094103. 11. An anti-inflammatory activation sequence governs macrophage transcriptional dynamics during tissue injury in zebrafish. Denans N, Tran NTT, Swall ME, Diaz DC, Blanck J, Piotrowski T. Nat Commun. 2022;13:5356 doi: 10.1038/s41467-022-33015-3. 12. Protocol to detect RNAs from tissue sections in mice using Y-branched probe in-situ hybridization. Wu Y, Yu CR. STAR Protoc. 2022;3:101686 doi: 10.1016/j.xpro.2022.101686. 13. A freeze-substitution approach with solvent-based glyoxal fixative to prevent distortion of ocular structures. Pang J, Zhao X, Deng F, Tsuchiya D, Malloy S, Parmely T, Xie T, Wang Y. [published ahead of print September 16 2022]. J Histotechnol. 2022:1-10. 14. Comparative development of limb musculature in phylogenetically and ecologically divergent lizards. Diaz RE, Jr., Taylor-Diaz EA, Trainor PA, Diogo R, Molnar JL. Dev Dyn. 2022:1576-1612. 15. Elevated levels of the methyltransferase SETD2 causes transcription and alternative splicing changes resulting in oncogenic phenotypes. Bhattacharya S, Reddy D, Zhang N, Li H, Workman J. Front Cell Dev Biol. 2022;10:945668 doi: 10.3389/fcell.2022.945668. 16. The Caenorhabditis elegans ASPP homolog APE-1 is a junctional protein phosphatase 1 modulator. Beacham GM, Wei DT, Beyrent E, Zhang Y, Zheng J, Camacho MMK, Florens L, Hollopeter G. Genetics. 2022;222 doi: 10.1093/genetics/iyac102. 17. An apical protein, Pcr2, is required for persistent movement by the human parasite Toxoplasma gondii. Munera Lopez J, Tengganu IF, Liu J, Murray JM, Arias Padilla LF, Zhang Y, Brown PT, Florens L, Hu K. PLoS Pathog. 2022;18:e1010776 doi: 10.1371/journal.ppat.1010776. 18. Dual control of formin-nucleated actin assembly by the chromatin and ER in mouse oocytes. Wang H, Hu J, Yi K, Ma Z, Song X, Lee Y, Kalab P, Bershadsky AD, Miao Y, Li R. [published ahead of print August 19 2022]. Curr Biol. 2022. 19. Dynamic regulation and requirement for ribosomal RNA transcription during mammalian development. Falcon KT, Watt KEN, Dash S, Zhao R, Sakai D, Moore EL, Fitriasari S, Childers M, Sardiu ME, Swanson S, Tsuchiya D, Unruh J, Bugarinovic G, Li L, Shiang R, Achilleos A, Dixon J, Dixon MJ, Trainor PA. Proc Natl Acad Sci U S A. 2022;119:e2116974119 doi: 10.1073/pnas.2116974119. 20. iCodon customizes gene expression based on the codon composition. Diez M, Medina-Munoz SG, Castellano LA, da Silva Pescador G, Wu Q, Bazzini AA. Sci Rep. 2022;12:12126 doi: 10.1038/s41598-022-15526-7. 21. Divergent evolutionary pathways for aggression and territoriality in Astyanax cavefish. Espinasa L, Collins E, Ornelas-Garcia CP, Retaux S, Rohner N, Rutkowski J. Subterranean Biol. 2022;43:169-183. 22. Single-cell transcriptomics and gene-regulatory networks modulated by Wntless in mammalian midline facial formation and clefts. Gu R, Zhang S, Saha SK, Ji Y, Reynolds K, McMahon M, Sun B, Islam M, Trainor PA, Chen Y, Xu Y, Chai Y, Burkart-Waco D, Zhou CJ. [published ahead of print July 4 2022]. Development. 2022. 23. Nucleolin loss of function leads to aberrant Fibroblast Growth Factor signaling and craniofacial anomalies. Dash S, Trainor PA. [published ahead of print June 29 2022]. Development. 2022;149. 24. A nucleation barrier spring-loads the CBM signalosome for binary activation. Rodriguez Gama A, Miller T, Lange JJ, Unruh JR, Halfmann R. eLife. 2022;11:e79826. doi: 10.7554/eLife.79826. 25. Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation. Krishnan J, Wang Y, Kenzior O, Hassan H, Olsen L, Tsuchiya D, Kenzior A, Peuss R, Xiong S, Wang Y, Zhao C, Rohner N. Sci Rep. 2022;12:10115. doi: 10110.11038/s41598-10022-14507-10110. 26. The architecture and operating mechanism of a cnidarian stinging organelle. Karabulut A, McClain M, Rubinstein B, Sabin KZ, McKinney SA, Gibson MC. Nat Commun. 2022;13:3494. doi: 10.1038/s41467-41022-31090. 27. Molecular characterization of a flatworm Girardia isolate from Guanajuato, Mexico. Duncan EM, Nowotarski SH, Guerrero-Hernandez C, Ross EJ, D'Orazio JA, Clubes de Ciencia Mexico Workshop for Developmental B. [published ahead of print June 17 2022]. Dev Biol 2022. 28. The metabolome of Mexican cavefish shows a convergent signature highlighting sugar, antioxidant, and Ageing-Related metabolites. Medley JK, Persons J, Biswas T, Olsen L, Peuss R, Krishnan J, Xiong S, Rohner N. eLife. 2022;11:e74539. doi: 74510.77554/eLife.74539. 29. Nature of the Poynting Vector Field Singularities in Resonant Light Scattering by Nanoparticles. Tribelsky MI, Rubinstein BY. Nanomaterials (Basel). 2022;12:1878. doi: 1810.3390/nano12111878. 30. Mediator recruits the cohesin loader Scc2 to RNA Pol II transcribed genes and promotes sister chromatid cohesion. Mattingly M, Seidel C, Munoz S, Hao Y, Zhang Y, Wen Z, Florens L, Uhlmann F, Gerton JL. [published ahead of print June 3 2022]. Curr Biol. 2022;32. 31. Island-specific evolution of a sex-primedautosome in a sexual planarian. Guo L, Bloom JS, Dols-Serrate D, Boocock J, Ben-David E, Schubert OT, Kozuma K, Ho K, Warda E, Chui C, Wei Y, Leighton D, Lemus Vergara T, Riutort M, SNCHEZ Alvarado A, Kruglyak L. [published ahead of print June 1 2022]. Nature. 2022;606:329-334. |
| FORM 990, PART III, LINE 4A - CONT'D | 32. The 3' Pol II pausing at replication-dependenthistone genes is regulated by Mediator throughCajal bodies' association with histone locus bodies. Suzuki H, Abe R, Shimada M, Hirose T, Hirose H, Noguchi K, Ike Y, Yasui N, Furugori K, Yamaguchi Y, Toyoda A, Suzuki Y, Yamamoto T, Saitoh N, Sato S, Tomomori-Sato C, Conaway RC, Conaway JW, Takahashi H. Nat Commun. 2022;13:2905. doi: 2910.1038/s41467-41022-30632-w. 33. Hmx gene conservation identifies the origin of vertebrate cranial ganglia. Papadogiannis V, Pennati A, Parker HJ, Rothbacher U, Patthey C, Bronner ME, Shimeld SM. [published ahead of print May 19 2022]. Nature. 2022. 34. Genome-wide analysis of cis-regulatory changes in the metabolic adaptation of cavefish. Krishnan J, Seidel CW, Zhang N, Singh NP, VanCampen J, Peuss R, Xiong S, Kenzior A, Li H, Conaway JW, Rohner N. Nat Genet. 2022;54:684-693. 35. UBAP2/UBAP2L regulate UV-induced ubiquitylation of RNA polymerase II and are the human orthologues of yeast Def1. Herlihy AE, Boeing S, Weems JC, Walker J, Dirac-Svejstrup AB, Lehner MH, Conaway RC, Conaway JW, Svejstrup JQ. DNA Repair (Amst). 2022;115:103343. doi: 103310.101016/j.dnarep.102022.103343. 36. In-depth Satellitome Analyses of 37 Drosophila species illuminate repetitive DNA evolution in the Drosophila genus. de Lima LG, Ruiz-Ruano FJ. Genome Biol Evol. [published ahead of print May 6 2022]. 2022. 37. Robust and sensitive in situ RNA detection method using Yn-situ. Wu Y, Xu W, Yu Z, Wang Y, Yu CR. Cell Rep Methods. 2022;2:100201. doi: 100210.101016/j.crmeth.102022.100201. 38. Lack of VMP1 Impairs Hepatic Lipoprotein Secretion and Promotes Nonalcoholic Steatohepatitis. Jiang X, Fulte S, Deng F, Chen S, Xie Y, Chao X, He XC, Zhang Y, Li T, Li F, McCoin C, Morris EM, Thyfault J, Liu W, Li L, Davidson NO, Ding WX, Ni HM. Lack of VMP1 Impairs Hepatic Lipoprotein Secretion and Promotes Nonalcoholic Steatohepatitis. [Published ahead of print April 23 2022]. J Hepatol. 2022. 39. Maximal Dependence Capturing as a Principle of Sensory Processing. Raj R, Dahlen D, Duyck K, Yu CR. Front Comput Neurosci. 2022;16:857653. 40. Enhanced lipogenesis through Ppary helps cavefish adapt to food scarcity. Xiong S, Wang W, Kenzior A, Olsen L, Krishnan J, Persons J, Medley K, Peuss R, Wang Y, Chen S, Zhang N, Thomas N, Miles JM, SNCHEZ Alvarado A, Rohner N. [published ahead of print April 8 2022]. Curr Biol. 2022. 41. Complete genomic and epigenetic maps of human centromeres. Altemose N, Logsdon GA, Bzikadze AV, Sidhwani P, Langley SA, Caldas GV, Hoyt SJ, Uralsky L, Ryabov FD, Shew CJ, Sauria MEG, Borchers M, Gershman A, Mikheenko A, Shepelev VA, Dvorkina T, Kunyavskaya O, Vollger MR, Rhie A, McCartney AM, Asri M, Lorig-Roach R, Shafin K, Lucas JK, Aganezov S, Olson D, de Lima LG, Potapova T, Hartley GA, Haukness M, Kerpedjiev P, Gusev F, Tigyi K, Brooks S, Young A, Nurk S, Koren S, Salama SR, Paten B, Rogaev EI, Streets A, Karpen GH, Dernburg AF, Sullivan BA, Straight AF, Wheeler TJ, Gerton JL, Eichler EE, Phillippy AM, Timp W, Dennis MY, O'Neill RJ, Zook JM, Schatz MC, Pevzner PA, Diekhans M, Langley CH, Alexandrov IA, Miga KH. [published ahead of print April 1 2022]. Science. 2022;376:eabl4178. 42. From telomere to telomere: The transcriptional and epigenetic state of human repeat elements. Hoyt SJ, Storer JM, Hartley GA, Grady PGS, Gershman A, de Lima LG, Limouse C, Halabian R, Wojenski L, Rodriguez M, Altemose N, Rhie A, Core LJ, Gerton JL, Makalowski W, Olson D, Rosen J, Smit AFA, Straight AF, Vollger MR, Wheeler TJ, Schatz MC, Eichler EE, Phillippy AM, Timp W, Miga KH, O'Neill RJ. [published ahead of print April 1 2022]. Science. 2022;376:eabk3112. 43. Quantitative analysis of nuclear pore complex organization in Schizosaccharomyces pombe. Varberg JM, Unruh JR, Bestul AJ, Khan AA, Jaspersen SL. [published ahead of print April 1 2022]. Life Sci Alliance. 2022;5:e202201423. doi: 10.26508/lsa.XXX-XX-XXXX 44. The complete sequence of a human genome. Nurk S, Koren S, Rhie A, Rautiainen M, Bzikadze AV, Mikheenko A, Vollger MR, Altemose N, Uralsky L, Gershman A, Aganezov S, Hoyt SJ, Diekhans M, Logsdon GA, Alonge M, Antonarakis SE, Borchers M, Bouffard GG, Brooks SY, Caldas GV, Chen NC, Cheng H, Chin CS, Chow W, de Lima LG, Dishuck PC, Durbin R, Dvorkina T, Fiddes IT, Formenti G, Fulton RS, Fungtammasan A, Garrison E, Grady PGS, Graves-Lindsay TA, Hall IM, Hansen NF, Hartley GA, Haukness M, Howe K, Hunkapiller MW, Jain C, Jain M, Jarvis ED, Kerpedjiev P, Kirsche M, Kolmogorov M, Korlach J, Kremitzki M, Li H, Maduro VV, Marschall T, McCartney AM, McDaniel J, Miller DE, Mullikin JC, Myers EW, Olson ND, Paten B, Peluso P, Pevzner PA, Porubsky D, Potapova T, Rogaev EI, Rosenfeld JA, Salzberg SL, Schneider VA, Sedlazeck FJ, Shafin K, Shew CJ, Shumate A, Sims Y, Smit AFA, Soto DC, Sovic I, Storer JM, Streets A, Sullivan BA, Thibaud-Nissen F, Torrance J, Wagner J, Walenz BP, Wenger A, Wood JMD, Xiao C, Yan SM, Young AC, Zarate S, Surti U, McCoy RC, Dennis MY, Alexandrov IA, Gerton JL, O'Neill RJ, Timp W, Zook JM, Schatz MC, Eichler EE, Miga KH, Phillippy AM. Science. 2022;376:44-53. 45. H3K36 methylation and DNA-binding both promote Ioc4 recruitment and Isw1b remodeler function. Li J, Bergmann L, Rafael de Almeida A, Webb KM, Gogol MM, Voigt P, Liu Y, Liang H, Smolle MM. Nucleic Acids Res. 2022;50:2549-2565. 46. Single-cell transcriptome analysis reveals three sequential phases of gene expression during zebrafish sensory hair cell regeneration. Baek S, Tran NTT, Diaz DC, Tsai YY, Acedo JN, Lush ME, Piotrowski T. [published ahead of print March 28 2022]. Dev Cell. 2022;57:1-21. doi: 10.1016/j.devcel.2022.1003.1001. 47. Functional genomics of RAP proteins and their role in mitoribosome regulation in Plasmodium falciparum. Hollin T, Abel S, Falla A, Pasaje CFA, Bhatia A, Hur M, Kirkwood JS, Saraf A, Prudhomme J, de Souza A, Florens L, Niles JC, Le Roch KG. Nat Commun. 2022;13:1275. doi: 1210.1038/s41467-41022-28981-41467. 48. A putative cap binding protein and the methyl phosphate capping enzyme Bin3/MePCE function in telomerase biogenesis. Paez-Moscoso DJ, Ho DV, Pan L, Hildebrand K, Jensen KL, Levy MJ, Florens L, Baumann P. Nat Commun. 2022;13:1067. doi: 1010.1038/s41467-41022-28545-41469. 49. MPTAC links alkylation damage signaling to sterol biosynthesis. Suganuma T, Workman JL. Redox Biol. 2022;51:102270. doi: 102210.101016/j.redox.102022.102270. 50. Cytidine acetylation yields a hypoinflammatory synthetic messenger RNA. Nance KD, Gamage ST, Alam MM, Yang A, Levy MJ, Link CN, Florens L, Washburn MP, Gu S, Oppenheim JJ, Meier JL. Cell Chem Biol. 2022;29:312-320 e317. 51. Hybridization underlies localized trait evolution in cavefish. Moran RL, Jaggard JB, Roback EY, Kenzior A, Rohner N, Kowalko JE, Ornelas-Garcia CP, McGaugh SE, Keene AC. iScience. 2022;25:103778. doi: 103710.101016/j.isci.102022.103778. 52. Cell Sorter Cleaning Practices and Their Impact on Instrument Sterility. Box A, Holmes L, DeLay M, Adams D, Bergeron A, Clise-Dwyer K, Cochran M, del Rio Guerra R, Handley M, Meyer M, Meyer EM, Saluk A, Brundage K. J Biomol Tech (JBT). 2022;33:e2675d2674. doi: 2610.7171/2673fc2671f2675fe.e2675d2674. 53. MOCS2 links nucleotide metabolism to nucleoli function. Suganuma T, Swanson SK, Gogol M, Garrett TJ, Florens L, Workman JL. J Mol Cell Biol. 2022;13:838-840. 54. A High-throughput Automated ELISA Assay for Detection of IgG Antibodies to the SARS-CoV-2 Spike Protein. Conkright-Fincham J, Tomomori-Sato C, McGhee R, Leslie EM, Beucher CJ, Weems LE, Sato S, Redwine WB, Weaver KJ, Miller BD, Delventhal KM, Kary JJ, Koebbe AB, Dean A, Witt JL, Remy LM, Parmely TJ, Zhao C, Wang Y, Conaway JW, Unruh JR. Bio-protocol. 2022;12:e4301. doi: 4310.21769/BioProtoc.24301. 55. Impact of cilia-related genes on mitochondrial dynamics during Drosophila spermatogenesis. Bauerly E, Akiyama T, Staber C, Yi K, Gibson MC. Dev Biol. 2022;482:17-27. 56. Retinoic Acid Deficiency Underlies the Etiology of Midfacial Defects. Wu Y, Kurosaka H, Wang Q, Inubushi T, Nakatsugawa K, Kikuchi M, Ohara H, Tsujimoto T, Natsuyama S, Shida Y, Sandell LL, Trainor PA, Yamashiro T. J Dent Res. 2022:220345211062049. 57. Comprehensive Structure and Functional Adaptations of the Yeast Nuclear Pore Complex. Akey CW, Singh D, Ouch C, Echeverria I, Nudelman I, Varberg JM, Yu Z, Fang F, Shi Y, Wang J, Salzberg D, Song K, Xu C, Gumbart JC, Suslov S, Unruh J, Jaspersen SL, Chait BT, Sali A, Fernandez-Martinez J, Ludtke SJ, Villa E, Rout MP. Cell. 2022;185:361-378 e325. |
| FORM 990, PART III, LINE 4A - CONT'D | 58. Optimized CRISPR-RfxCas13d system for RNA targeting in zebrafish embryos. Hernandez-Huertas L, Kushawah G, Diaz-Moscoso A, Tomas-Gallardo L, Moreno-SNCHEZ I, da Silva Prescador G, Bazzini AA, Moreno-Mateos MA. STAR-Protocol. 2022;3:101058. doi: 10.1016/j.xpro.2021.101058. Reviews, Commentaries, Chapters, Books 1. Casting CRISPR-Cas13d to fish for microprotein functions in animal development. Treichel AJ, Bazzini AA. iScience. 2022;25:105547 doi: 10.1016/j.isci.2022.105547. 2. Nucleolar Organizer Regions as transcription-based scaffolds of nucleolar structure and function. Cockrell AJ, Gerton JL. In: M Kloc, and JZ Kubiak, eds. Nuclear, Chromosomal, and Genomic Architecture in Biology and Medicine. Results and Problems in Cell Differentiation. 2022/11/09 ed; 2022;70:551-580. 3. Guide for collecting and reporting metadata on protocol variables and parameters from slide-based histotechnology assays to enhance reproducibility. Chiriboga L, Callis GM, Wang Y, Chlipala E. J Histotechnol. 2022:132-147. 4. RNA-Responsive gRNAs for Controlling CRISPR Activity: Current Advances, Future Directions, and Potential Applications. Pelea O, Fulga TA, Sauka-Spengler T. CRISPR J. 2022;5:642-659. 5. Drug Resistance and Evolvability in an Emerging Human Fungal Pathogen. Billmyre RB. mBio. 2022:e0187622 doi: 10.1128/mbio.01876-22. 6. Poor eyesight reveals a new vision gene. Biswas T, Krishnan J, Rohner N. eLife. 2022;11 doi: 10.7554/eLife.81520. 7. p57Kip2 indirectly regulates AGM HSCs. Mao X, Li L. Blood. 2022;140:411-412. 8. What can we learn from selfish loci that break Mendel's law? Zanders SE. PLoS Biol. 2022;20:e3001700. doi: 10.1371/journal.pbio.3001700. 9. Standardized annotation of translated open reading frames. Mudge JM, Ruiz-Orera J, Prensner JR, Brunet MA, Calvet F, Jungreis I, Gonzalez JM, Magrane M, Martinez TF, Schulz JF, Yang YT, Alba MM, Aspden JL, Baranov PV, Bazzini AA, Bruford E, Martin MJ, Calviello L, Carvunis AR, Chen J, Couso JP, Deutsch EW, Flicek P, Frankish A, Gerstein M, Hubner N, Ingolia NT, Kellis M, Menschaert G, Moritz RL, Ohler U, Roucou X, Saghatelian A, Weissman JS, van Heesch S. Nat Biotechnol. 2022;40:994-999. 10. Beyond Moco Biosynthesis-Moonlighting Roles of MoaE and MOCS2. Suganuma T. Molecules. 2022;27:3733. doi: 3710.3390/molecules27123733. 11. Diversification and Functional Evolution of HOX Proteins. Singh NP, Krumlauf R. Front Cell Dev Biol. 2022;10:798812. doi: 798810.793389/fcell.792022.798812. 12. Developmental biology is poised to discover altogether new principles in biology in the 21st century. SNCHEZ Alvarado A. Dev Biol. 2022;488:47-53. 13. RNA Polymerases I and III in development and disease. Watt KE, Macintosh J, Bernard G, Trainor PA. [published ahead of print April 16 2022]. Semin Cell Dev Biol. 2022. 14. Split-GFP Complementation to Study the Nuclear Membrane Proteome Using Microscopy. Shelton SN, Smith SE, Jaspersen SL. In: MW Goldberg, ed. Methods Mol Biol 2022/04/13 ed. New York, NY: Humana; 2022;2502 205-213. 15. Heat Therapy Can Improve Hepatic Mitochondrial Function and Glucose Control. Johnson CN, Jensen RS, Von Schulze AT, Geiger PC. [published ahead of print April 9 2022]. Exerc Sport Sci Rev. 2022. 16. Schmidtea happens: Re-establishing the planarian as a model for studying the mechanisms of regeneration. Newmark PA, SNCHEZ Alvarado A. Curr Top Dev Biol. 2022;147:307-344. 17. Cornelia de Lange syndrome and the Cohesin complex: Abstracts from the 9th Biennial Scientific and Educational Virtual Symposium 2020. Oliver C, Groves L, Hansen BD, Salehi M, Kheradmand S, Carrico CS, Caudill P, Mattingly M, Dorsett D, Chea S, Singh VP, Krantz ID, Huisman S, Deardorff MA, Kline AD. Am J Med Genet A. 2022;188A:1005-1014. 18. Standardized Statement for the Ethical Use of Human Cadaveric Tissues in Anatomy Research Papers: Recommendations from Anatomical Journal Editors-in-Chief. Iwanaga J, Singh V, Takeda S, Ogeng'o J, Kim HJ, Morys J, Ravi KS, Ribatti D, Trainor PA, Sanudo JR, Apaydin N, Sharma A, Smith HF, Walocha JA, Hegazy AMS, Duparc F, Paulsen F, Del Sol M, Adds P, Louryan S, Fazan VPS, Boddeti RK, Tubbs RS. Clin Anat. 2022;35:526-528. 19. YTHDF3 as a new player in hematopoietic stem cell regulation. Mao X, Li L. [published ahead of print February 4 2022]. Haematologica. 2022. 20. Superresolution Microscopy for Visualization of Physical Contacts Between Chromosomes at Nanoscale Resolution. Yu Z, Potapova TA. Methods Mol Biol. 2022;2458:359-375. 21. Live Imaging of the Dynamics of Mammalian Neural Crest Cell Migration. Moore EL, Trainor PA. Methods Mol Biol. 2022;2403:263-276. 22. Time to synchronize our clocks: Connecting developmental mechanisms and evolutionary consequences of heterochrony. Dobreva MP, Camacho J, Abzhanov A. J Exp Zool Pt B, Mol Dev Evol. 2022;338:87-106. 23. Transcriptional regulation and implications for controlling Hox gene expression. Afzal Z, Krumlauf R. J Dev Biol. 2022;10:4. doi: 10.3390/jdb10010004. 24. Manipulation of Gene Activity in the Regenerative Model Sea Anemone, Nematostella vectensis. Hill EM, Chen CY, Del Viso F, Ellington LR, He S, Karabulut A, Paulson A, Gibson MC. Methods Mol Biol. 2022;2450:437-465. Competitive Research Grant Funding & Research Awards & Distinctions The ability of Stowers scientists to receive competitively awarded research funding attests to the high level of research productivity present at the Institute. During 2022, Stowers scientists worked with the support of 39 grants and fellowships from the National Institutes of Health, three grants from the National Science Foundation, two fellowships from the National Science Foundation, one award from the Searle Scholars Program, one award from the Pew Charitable Trusts, one grant from the American Cancer Society, one grant from BioNexus KC, one grant from the Hearing Health Foundation, two grants from the University of Kansas Cancer Center, one grant from the American Society for Cell Biology, one fellowship from the Burroughs Wellcome Fund, one fellowship from the Howard Hughes Medical Institute, and one investigator award from the Howard Hughes Medical Institute. Support from new and continuing awards to the Stowers Institute totaled more than $6.3 million in 2022 to supplement income from its endowments. Testifying to the high level of achievement taking place at the Stowers Institute are the awards and honors Stowers members received in 2022: - Jennifer Gerton, Ph.D., received an R01 research grant from the National Institutes of Health. - Paul Kulesa, Ph.D., received an R21 research grant from the National Institutes of Health. - Ariel Bazzini, Ph.D., received an R21 research grant from the National Institutes of Health. - C. Ron Yu, Ph.D., received an R01 research grant renewal from the National Institutes of Health. - Jerry Workman, Ph.D., received an R35 research grant renewal from the National Institutes of Health. - Soma Dash, Ph.D., received a K99/R00 Pathway to Independence Award from the National Institutes of Health. - Jasmin Camacho, Ph.D., received a Hanna H. Gray Fellowship from the Howard Hughes Medical Institute and a postdoctoral diversity enrichment award from the Burroughs Wellcome Fund. - Ansa Cobham, Ph.D., received a grant from the American Society for Cell Biology and a scholarship from the International Federation of Cell Biology. - Kaelan Brennan received an F31 predoctoral fellowship from the National Institutes of Health. - Emma Moore received an F31 predoctoral fellowship from the National Institutes of Health. Independent Research Program Leaders Laboratories Individual scientists at the Stowers Institute perform fundamental biomedical research by studying research organisms, tissues, and cells to understand the molecular mechanisms underlying human health and disease. A comprehensive list of research leaders follows: - Alejandro SNCHEZ Alvarado, Ph.D., Executive Director and Chief Scientific Officer, Priscilla Wood Neaves Endowed Chair in the Biomedical Sciences, and Howard Hughes Medical Institute Investigator, joined the Stowers Institute in 2011 from the University of Utah's School of Medicine, where he held the H.A. & Edna Benning Professorship of Neurobiology and Anatomy. He received a B.S. in molecular biology and chemistry from Vanderbilt University in Nashville, Tennessee, and a Ph.D. in pharmacology and cell biophysics from the University of Cincinnati College of Medicine in Cincinnati, Ohio. Research focus: the molecular and cellular mechanisms underpinning animal regeneration using the planarian Schmidtea mediterranea and other research organisms. |
| FORM 990, PART III, LINE 4A - CONT'D | - Ariel Bazzini, Ph.D., Associate Investigator, joined the Stowers Institute in 2016 from the lab of Antonio J. Giraldez, Ph.D., in the Department of Genetics at Yale University, where he completed a postdoctoral fellowship. Bazzini received his Ph.D. in molecular biology at the University of Buenos Aires, Argentina. For his doctoral dissertation, he studied plant genetics at the Institute of Biotechnology in Argentina's National Institute of Agricultural Technology (INTA). Research focus: the regulation of gene expression in vertebrates. - Jennifer Gerton, Ph.D., Investigator, joined the Stowers Institute in 2002 from a postdoctoral fellowship in the laboratory of Joseph DeRisi, Ph.D., in the Department of Biochemistry and Biophysics at the University of California-San Francisco. Gerton received a Ph.D. in microbiology and immunology from Stanford University. Research focus: genomic and genetic analysis of chromosome segregation and chromosome dynamics. - Matthew Gibson, Ph.D., Investigator and Dean of the Graduate School, joined the Stowers Institute in 2006 from a Jane Coffin Childs Memorial Fund postdoctoral fellowship with Norbert Perrimon, Ph.D., at Harvard Medical School. Gibson received a Ph.D. in zoology from the University of Washington. Research focus: genetic analysis of mechanisms controlling signal transduction, cell proliferation, and epithelial morphogenesis during fruit fly, sea anemone, and coral development. - Randal Halfmann, Ph.D., Associate Investigator, joined the Stowers Institute in 2015 from The University of Texas (UT) Southwestern Medical Center. He received a Ph.D. in biology from the Massachusetts Institute of Technology, where he was a National Science Foundation Predoctoral Fellow. After completing his graduate studies, Halfmann obtained an independent position at UT Southwestern Medical Center where he was a Sara and Frank McKnight Fellow and received a Director's Early Independence Award from the National Institutes of Health. Research focus: Cellular and evolutionary implications of protein self-assembly using genetic, biochemical, and cell-biological approaches. - R. Scott Hawley, Ph.D., Investigator and Dean Emeritus of the Graduate School, joined the Stowers Institute in 2001 from the University of California-Davis where he was a professor of genetics in the Molecular and Cellular Biology section. Hawley earned a Ph.D. in genetics from the University of Washington and completed postdoctoral training as a Helen Hay Whitney Fellow at the Institute for Cancer Research in Philadelphia. Research focus: investigation of mechanisms that influence how chromosomes pair and segregate during meiosis using Drosophila as an experimental system. - Robert Krumlauf, Ph.D., Scientific Director Emeritus and Investigator, joined the Stowers Institute in 2000 from England's National Institute for Medical Research, The Ridgeway, Mill Hill, London, where he was head of the Division of Developmental Neurobiology. Krumlauf received a Ph.D. in developmental biology from Ohio State University. Research focus: analysis of molecular pathways that regulate how the mammalian head, brain and nervous system are built, using a variety of vertebrate research organisms. - Linheng Li, Ph.D., Investigator, joined the Stowers Institute in 2000 from the University of Washington Medical Center where he held a faculty appointment after completing postdoctoral training in the laboratory directed by Leroy Hood, M.D., Ph.D. Li earned his Ph.D. in molecular and cellular biology from New York University Medical School under the mentoring of Edward Ziff, Ph.D. Research focus: Investigation of molecular and genetic pathways controlling adult stem cell development in the hematopoietic and intestinal systems using transgenic and gene targeting animal model approaches. - Tatjana Piotrowski, Ph.D., Investigator, joined the Stowers Institute in 2011 from the University of Utah's School of Medicine, where she was an associate professor in the Department of Neurobiology and Anatomy. She received her master's degree from the University of Tubingen, Germany, and her doctorate degree from the Max Planck Institute for Developmental Biology in Tubingen. Research focus: collective cell migration, cell type specification, and stem cell biology in zebrafish as a research system. - Nicolas Rohner, Ph.D., Associate Investigator, joined the Stowers Institute in 2015 from Harvard Medical School, where he was a postdoctoral fellow in the laboratory of Cliff Tabin, Ph.D. Rohner earned a Ph.D. in biology from the Max Planck Institute for Developmental Biology in Tubingen, Germany. Research focus: genetic mechanisms and mutations that underlie the animal kingdom's tremendous diversity in morphology, physiology, and behavior. - Tatjana Sauka-Spengler, Ph.D., Investigator, joined the Stowers Institute in 2022 from the Weatherall Institute of Molecular Medicine at the University of Oxford, United Kingdom, where she continues to hold a professor position. Sauka-Spengler earned a Ph.D. in physics and a Ph.D. in biology from the University of Paris and completed postdoctoral training in the lab of Marianne Bronner, Ph.D., at the California Institute of Technology. Research focus: decoding the gene regulatory networks involved in cell function of the neural crest, heart, and nervous system to uncover the mechanisms underpinning inflammation and regeneration and how they have evolved. - Kausik Si, Ph.D., Scientific Director and Investigator, joined the Stowers Institute in 2005 from the laboratory of Eric Kandel, M.D., at Columbia University Center for Neurobiology and Behavior where he was a Jane Coffin Childs Fellow and a Francis Goelet Fellow in Neuroscience. Si earned a Ph.D. in molecular biology from the Albert Einstein College of Medicine. Research focus: role of synaptic protein synthesis in information acquisition and memory storage. - Paul Trainor, Ph.D., Investigator, joined the Stowers Institute in 2001 from a research position at the National Institute for Medical Research at Mill Hill, London, where he completed postdoctoral training. Trainor has a Ph.D. in developmental biology from Children's Medical Research Institute at the University of Sydney, Australia. Research focus: investigation of the interactions between distinct tissues in the body and their regulation during normal development to reveal pathways that regulate normal cranial and facial development. - Jerry Workman, Ph.D., Investigator, joined the Stowers Institute in 2003 from the Pennsylvania State University where he held the Paul Berg Professorship of Biochemistry and was an Associate Investigator of the Howard Hughes Medical Institute. Workman earned a Ph.D. in cell and molecular biology from the University of Michigan and completed postdoctoral training at the Rockefeller University with Bob Roeder, Ph.D. Research focus: study of the protein complexes that modify chromatin. - C. Ron Yu, Ph.D., Investigator, joined the Stowers Institute in 2005 from the laboratory of Richard Axel, M.D., at Columbia University Center for Neurobiology and Behavior where he held a National Institutes of Health Mentored Research Scientist Award from the National Institute of Mental Health. Yu earned his Ph.D. in molecular, cellular, and biophysical studies at Columbia University. Research focus: how olfactory sensory information is detected, integrated, and processed in the brain to influence specific innate behaviors. - SaraH Zanders, Ph.D., Associate Investigator and Vice Dean of the Graduate School, joined the Stowers Institute in 2016 after completion of her postdoctoral training in basic sciences at the Fred Hutchinson Cancer Research Center (Fred Hutch) with support from a Pathway to Independence Award from the National Institutes of Health. Fred Hutch faculty members Harmit S. Malik, Ph.D., and Gerry Smith, Ph.D., advised her research on fertility, genome evolution, and the origin of new species. Zanders received her Ph.D. in genetics and development from Cornell University. Research focus: the effects of genetic conflicts caused by selfish genes that are embedded in eukaryotic genomes. - Julia Zeitlinger, Ph.D., Investigator, joined the Stowers Institute in 2007 from the lab of Richard Young, Ph.D., at the Whitehead Institute for Biomedical Research at Massachusetts Institute of Technology where she was the recipient of a long-term postdoctoral fellowship from the Human Frontier Science Program. Zeitlinger earned a Ph.D. in molecular biology from the European Molecular Biology Laboratory in Heidelberg, Germany. Research focus: analysis of the gene regulatory networks underlying cellular differentiation. |
| FORM 990, PART VI, SECTION A, LINE 2 | JONATHAN THOMAS, RICHARD W. BROWN, DAVID A. WELTE, BRENT KREIDER, CHARLES GERMAN, ALBERZINE FREEMAN, AND ALEJANDRO SNCHEZ ALVARADO, ALL DIRECTORS OF SIMR, HAVE A BUSINESS RELATIONSHIP. JONATHAN THOMAS, RICHARD W. BROWN, CHARLES GERMAN, BRENT KREIDER, AND ALBERZINE FREEMAN, DIRECTORS OF SIMR, AND PENNY SPENCE, OFFICER OF SIMR, HAVE A BUSINESS RELATIONSHIP. RICHARD W. BROWN, CHARLES GERMAN, GEORGE L. SATTERLEE AND BRENT KREIDER, DIRECTORS OF SIMR, AND PENNY SPENCE, OFFICER OF SIMR, HAVE A BUSINESS RELATIONSHIP. |
| FORM 990, PART VI, SECTION B, LINE 11B | THE DATA AND INFORMATION NECESSARY TO PREPARE SIMR'S FORM 990 WAS COMPILED BY SIMR'S ACCOUNTING DEPARTMENT AND THEN REVIEWED BY THE INSTITUTE'S TAX ATTORNEY AT BRYAN CAVE LEIGHTON PAISNER, LLP. FORVIS, LLP, THE INSTITUTE'S EXTERNAL TAX PREPARERS, USED THIS INFORMATION TO PREPARE THE FORM 990. THE COMPLETED FORM 990, INCLUDING REQUIRED SCHEDULES, IS REVIEWED BY THE OFFICERS OF SIMR BEFORE IT IS FILED WITH THE IRS. AFTER THE PREPARATION AND REVIEW PROCESS DESCRIBED ABOVE, THE FORM 990, INCLUDING REQUIRED SCHEDULES, IS PROVIDED TO EACH VOTING MEMBER OF THE ORGANIZATION'S BOARD BEFORE IT IS FILED WITH THE IRS. |
| FORM 990, PART VI, SECTION B, LINE 12C | SIMR HAS ADOPTED A "CONFLICTS OF INTEREST AND DIRECTOR INDEPENDENCE POLICY". EACH DIRECTOR, OFFICER, AND ALL OTHER PERSONS IN A POSITION TO EXERCISE SUBSTANTIAL INFLUENCE OVER DECISIONS OF SIMR ARE REQUIRED TO ANNUALLY COMPLETE AND SIGN A DISCLOSURE STATEMENT THAT IS PART OF THE POLICY. A COVERED PERSON MUST ALSO DISCLOSE THE EXISTENCE OF A POTENTIAL CONFLICT AND ALL MATERIAL FACTS TO THE GOVERNING BOARD AS SOON AS THE PERSON HAS KNOWLEDGE THAT A POTENTIAL CONFLICT MIGHT EXIST. PER THE POLICY, THE BOARD THEN REVIEWS THE DISCLOSURE TO DETERMINE WHETHER A CONFLICT EXISTS. AFTER THE COVERED PERSON MAKES THE RELEVANT DISCLOSURE, THEY ARE RECUSED AND MAY NOT PARTICIPATE IN THE DELIBERATIONS AND DECISIONS REGARDING THE TRANSACTION. SIMR CONDUCTS PERIODIC AND ADHOC REVIEWS OF TRANSACTIONS AND AGREEMENTS TO ENSURE THAT IT ENGAGES ONLY IN ACTIVITIES THAT ARE CONSISTENT WITH ITS TAX-EXEMPT PURPOSE. |
| FORM 990, PART VI, SECTION B, LINE 15A | THE COMPENSATION FOR ALEJANDRO SNCHEZ ALVARADO, CHIEF SCIENTIFIC OFFICER, WAS ESTABLISHED PURSUANT TO THE PROCEDURES OF TREAS. REG. SECTION 53.4958-6, INCLUDING (1) REVIEW AND APPROVAL BY SIMR'S COMPENSATION COMMITTEE COMPRISED OF INDEPENDENT PERSONS, (2) RELYING ON COMPARABILITY DATA, INCLUDING DATA PREPARED BY A NATIONALLY KNOWN COMPENSATION CONSULTANT REGARDING COMPARABLE SALARY AND BENEFITS FOR SIMILARLY QUALIFIED PERSONS IN FUNCTIONALLY COMPARABLE POSITIONS AT SIMILARLY SITUATED ORGANIZATIONS, AND (3) CONTEMPORANEOUS DOCUMENTATION AND RECORD KEEPING OF THE DELIBERATION AND DECISIONS REGARDING THE COMPENSATION ARRANGEMENT. THIS PROCESS WAS LAST UNDERTAKEN IN 2021. |
| FORM 990, PART VI, SECTION B, LINE 15B | THE COMPENSATION FOR KAUSIK SI, SCIENTIFIC DIRECTOR, WAS ESTABLISHED PURSUANT TO THE PROCEDURES OF TREAS. REG. SECTION 53.4958-6, INCLUDING (1) REVIEW AND APPROVAL BY SIMR'S COMPENSATION COMMITTEE COMPRISED OF INDEPENDENT PERSONS, (2) RELYING ON COMPARABILITY DATA, INCLUDING DATA PREPARED BY A NATIONALLY KNOWN COMPENSATION CONSULTANT REGARDING COMPARABLE SALARY AND BENEFITS FOR SIMILARLY QUALIFIED PERSONS IN FUNCTIONALLY COMPARABLE POSITIONS AT SIMILARLY SITUATED ORGANIZATIONS, AND (3) CONTEMPORANEOUS DOCUMENTATION AND RECORD KEEPING OF THE DELIBERATION AND DECISIONS REGARDING THE COMPENSATION ARRANGEMENT. THIS PROCESS WAS LAST UNDERTAKEN IN 2021. |
| FORM 990, PART VI, SECTION C, LINE 19 | SIMR'S GOVERNING DOCUMENTS, CONFLICT OF INTEREST POLICY, AND FINANCIAL STATEMENTS ARE AVAILABLE UPON REQUEST. |
| FORM 990, PART VII, SECTION B | SIMR RECEIVES INVESTMENT MANAGEMENT SERVICES FROM AMERICAN CENTURY INVESTMENTS ("ACI"). ACI IS A WHOLLY OWNED SUBSIDIARY OF AMERICAN CENTURY COMPANIES, INC. ("ACCI"). IN SELECTING ACI TO MANAGE ITS LIQUID INVESTMENTS, SIMR NOT ONLY CHOSE A HIGH-QUALITY MUTUAL FUND COMPANY WITH AN OUTSTANDING TRACK RECORD, BUT ALSO PLACED ITS LIQUID INVESTMENTS IN A COMPANY IN WHICH IT OWNS STOCK AND RECEIVES DIVIDENDS. SIMR PAYS ACI THE SAME ADMINISTRATIVE FEES FOR THESE SERVICES AS ANY ARMS-LENGTH INVESTOR. THOSE INVESTMENT FEES FOR A SHARED INVESTMENT POOL ARE PAID BY ITS SUPPORTING ORGANIZATION, STOWERS RESOURCE MANAGEMENT. |
| FORM 990, PART XI, LINE 9 | OTHER CHANGES IN NET ASSETS INCLUDE THE FOLLOWING: UNCOLLECTIBLE GRANTS ($ 88,967) GRANTS RECEIVABLES AND OTHER RECEIVABLES CONSIST PRIMARILY OF AMOUNTS DUE FROM FEDERAL AND OTHER GRANT FUNDING AGENCIES ON A COST-REIMBURSABLE BASIS AND FROM OTHER NONPROFIT ORGANIZATIONS THAT REIMBURSE THE INSTITUTE PRIMARILY FOR COLLABORATION EXPENSES OR PROVIDE CONTRIBUTION TO THE INSTITUTE. BASED ON HISTORICAL EXPERIENCE, THESE RECEIVABLES ARE PAID IN FULL ON A TIMELY BASIS. HOWEVER, BASED ON REVIEW OF OUTSTANDING RECEIVABLES AND EXISTING CONDITIONS, AN ALLOWANCE FOR UNCOLLECTIBLE ACCOUNTS AND BAD DEBT & COLLECTION FEES ACCOUNTS WERE ESTABLISHED IN 2022 FOR $88,967. |
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